Doctoral Fellow in Metaproteomics Bioinformatics: Ghent University is offering a full-time position for a Doctoral Fellow to advance metaproteomics bioinformatics through the development of novel algorithms aimed at improving microbial protein identification and annotation.
Designation
Doctoral Fellow in the Department of Mathematics, Computer Science, and Statistics
| Details | Information |
|---|---|
| Research Area | Metaproteomics Bioinformatics |
| Location | Ghent University, Belgium |
| Eligibility/Qualification | – Master’s degree in Computer Science, Bioinformatics, or related fields – Must not hold a doctoral degree (PhD) – Must comply with international mobility conditions |
| Salary | 100% of the net salary of an AAP member, determined by personal circumstances |
| Contract Duration | Initial 12 months (extendable up to 48 months upon evaluation) |
Research Area
The project will focus on developing high-performance algorithms to enhance the identification and annotation of microbial proteins, addressing limitations in existing tools.
Description
The successful candidate will:
- Develop a bi-directional FM-index-based search engine for approximate peptide matching.
- Extend existing tools like Unipept for metabolic pathway annotation and SNP-tolerant matching.
- Integrate outcomes into a unified open-source data analysis pipeline, improving taxonomic and functional resolution of metaproteomics datasets.
The position is part of the METAMIC project, funded by the European Commission under Horizon Europe, focusing on microbiome management through metaproteomics.
How to Apply
Interested candidates should submit:
- An extended CV with a full publication list
- A cover letter
- Copies of diplomas
- A 2-page research statement detailing their research profile and methodological competencies
- Names and contact information of two references
Applications should be sent to bart.mesuere@ugent.be. Informal inquiries are also welcome at the same email.
Last Date for Application
September 15, 2025
For further details, please refer to the official Ghent University website.
