PhD in Bioinformatics and Computational Biology: The University Hospital Essen is offering a PhD scholarship for a highly motivated candidate in bioinformatics and computational biology. The position is within the Department of Hematology and Stem Cell Transplantation and focuses on analyzing cancer-related genomic datasets using cutting-edge computational methods. The selected candidate will have access to state-of-the-art technologies and interdisciplinary collaborations in an enriching academic environment.
PhD Scholarship in Bioinformatics and Computational Biology at University Hospital Essen
Designation:
PhD Student (m/f/d)
Research Area:
Bioinformatics, Computational Biology, Cancer Genomics, Tumor Microenvironment Analysis
Location:
University Hospital Essen, Germany
Eligibility/Qualification:
- Diploma or Master’s degree in natural or life sciences with a strong academic record.
- Proficiency in Linux/UNIX-based systems and HPC environments.
- Experience in R and/or Python for data analysis and visualization.
- Familiarity with workflow management tools (Snakemake, Nextflow).
- Strong coding skills, including version control (Git) and script documentation.
- Knowledge of sequencing data analysis, including sequence alignment, quality control, and variant calling.
- Familiarity with sequencing databases (TCGA/ICGC, UCSC, Ensemble).
- Basic understanding of cell biology, molecular biology, and cancer biology.
- Fluency in scientific English.
Job Description:
- Conduct computational analysis of large-scale genomic datasets.
- Apply and develop computational tools for mutational signature analysis.
- Process raw sequencing data (Whole Genome and single nucleus RNA sequencing).
- Contribute to scientific publications and presentations.
- Plan, perform, and document bioinformatics laboratory work.
- Collaborate with the Institute for Artificial Intelligence in Medicine (IKIM).
- Present findings in internal and external meetings.
How to Apply:
Interested candidates can submit their application online through the following link: Apply Now. For inquiries, contact Dr. Emre Kocakavuk at emre.kocakavuk@uk-essen.de.
Last Date to Apply:
Applications will be accepted until the position is filled. Early applications are encouraged.
Additional Benefits:
- Access to cutting-edge genomic research datasets (GLASS, HMF, ICGC-PCAWG, AACR-GENIE).
- Structured PhD program through the Graduate School of Biomedical Science (BIOME).
- Interdisciplinary networking and international collaborations.
- Competitive salary (EG 13 TV-L pay grade).
- 30 days of vacation per year (full-time position).
- Comprehensive training in bioinformatics technologies.
- Supportive work environment with interdisciplinary research opportunities.
- Family-friendly corporate culture, including daycare and employee support services.
This is an excellent opportunity to work in an innovative research setting with access to top-tier computational infrastructure and scientific expertise. Apply now to become part of a leading research team in cancer genomics!
