PhD in Conservation Genomics: This PhD position invites applications for research focused on utilizing bioinformatics and genomic tools to study the genomic compatibility of endangered Asian elephant populations. The project is part of the NWO-VIDI ExPANsion initiative emphasizing the restoration of ecosystems.
PhD in Conservation Genomics of Asian Elephants
Designation
PhD Candidate
Research Area
Conservation Genomics, Ecology, Evolution, Bioinformatics
Location
Vrije Universiteit Amsterdam, O2 Gebouw, Amsterdam, Netherlands, with collaboration at Rotterdam Zoo.
Eligibility/Qualification
- MSc in Biology, Genetics, Animal Breeding, Conservation Sciences, Bioinformatics, or a related field.
- Good command-line skills and programming experience (Python or bash).
- Experience with next- and third-generation sequencing technologies such as Illumina, PacBio, or Oxford Nanopore.
- Ideally, background in pan-genomics of vertebrates (experience with Asian elephants is advantageous but not mandatory).
- Proficiency in English (spoken and written).
- Affinity for outreach activities and teamwork in an international multidisciplinary setting.
Job Description
- Develop a high-quality reference genome for each Asian elephant population using nanopore technologies.
- Explore structural genomic differences by creating a pan-genome graph.
- Perform population genomics analyses to understand genetic loads from SNPs and Structural Variants.
- Establish a decision-making framework for planned connectivity based on genomic information.
- Author and co-author research manuscripts for publication in high-quality journals.
- Support teaching within the department (10% of time).
- Present research findings at various meetings and engage with non-academic stakeholders.
How to Apply
Interested candidates are encouraged to submit a motivation letter detailing their qualifications, a comprehensive CV, a list of MSc grades, and contact information for two academic referees. All documents should be compiled into a single PDF and submitted via the application button on the university’s recruitment page.
Last Date to Apply
December 15, 2025
For more information about this position, please contact Dr. Mirte Bosse, Assistant Professor.
